Placeholder image of a protein
Icon representing a puzzle

447: De-novo Freestyle 12

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for BOINC@Poland 11. BOINC@Poland 7 pts. 10,102
  2. Avatar for hhv9 12. hhv9 5 pts. 10,021
  3. Avatar for Mojo Risin' 13. Mojo Risin' 4 pts. 9,778
  4. Avatar for Cannabis Crew 14. Cannabis Crew 3 pts. 9,360
  5. Avatar for Eὕρηκα! Heureka! 15. Eὕρηκα! Heureka! 2 pts. 9,345
  6. Avatar for Extraterrestrials 16. Extraterrestrials 1 pt. 9,213
  7. Avatar for Crunching Family 17. Crunching Family 1 pt. 9,004
  8. Avatar for Penny-Arcade 18. Penny-Arcade 1 pt. 8,996
  9. Avatar for Team China 19. Team China 1 pt. 8,639
  10. Avatar for Deleted group 20. Deleted group pts. 8,271
  1. Avatar for alpengaudi 201. alpengaudi Lv 1 1 pt. 7,778
  2. Avatar for 5314402424 202. 5314402424 Lv 1 1 pt. 7,720
  3. Avatar for pipeloko 203. pipeloko Lv 1 1 pt. 7,715
  4. Avatar for Christoph 204. Christoph Lv 1 1 pt. 7,703
  5. Avatar for Ralph Schraven 205. Ralph Schraven Lv 1 1 pt. 7,650
  6. Avatar for NeedMoreCoffee 206. NeedMoreCoffee Lv 1 1 pt. 7,616
  7. Avatar for 5316000447 207. 5316000447 Lv 1 1 pt. 7,610
  8. Avatar for kiattawee 208. kiattawee Lv 1 1 pt. 7,596
  9. Avatar for zigzagwanderer 209. zigzagwanderer Lv 1 1 pt. 7,554
  10. Avatar for keith20 210. keith20 Lv 1 1 pt. 7,553

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.