447: De-novo Freestyle 12

Closed since over 14 years ago

Summary

• Created: August 16, 2011
• Expires: August 24, 2011 at 13:00 UTC
• Max points: 100

Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

• 1. foldeRNA 100 pts. 10,969
• 2. Anthropic Dreams 81 pts. 10,871
• 3. Contenders 65 pts. 10,865
• 4. Void Crushers 52 pts. 10,789
• 5. Go Science 41 pts. 10,730
• 6. Russian team 32 pts. 10,311
• 7. Deleted group pts. 10,201
• 8. SETI.Germany 18 pts. 10,149
• 9. L'Alliance Francophone 14 pts. 10,131
• 10. Natural Abilities 10 pts. 10,106

Top soloists

• 1. wudoo 100 pts. 10,969
• 2. Enzyme 98 pts. 10,915
• 3. Mark- 96 pts. 10,856
• 4. deus911 94 pts. 10,822
• 5. Madde 92 pts. 10,789
• 6. Deleted player pts. 10,786
• 7. gdnskye 88 pts. 10,784
• 8. martinzblavy 87 pts. 10,757
• 9. pauldunn 85 pts. 10,730
• 10. anthunk 83 pts. 10,687

Comments

[beta_helix]

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.

[rws]

This is a conserved hypothetical from Pseudomonas aeruginosa. No models. No known function. No known domains.

http://www.uniprot.org/uniprot/Q9I6A7

Regards,
rws