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447: De-novo Freestyle 12

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for name_in_progress 21. name_in_progress 1 pt. 7,778
  2. Avatar for DSN @ Home 22. DSN @ Home 1 pt. 7,553
  3. Avatar for R12 23. R12 1 pt. 7,514
  4. Avatar for test_group1 24. test_group1 1 pt. 642
  5. Avatar for Freedom Folders 25. Freedom Folders 1 pt. 642
  1. Avatar for Deleted player 91. Deleted player pts. 9,756
  2. Avatar for mirjamvandelft 92. mirjamvandelft Lv 1 9 pts. 9,754
  3. Avatar for 5414400725 93. 5414400725 Lv 1 9 pts. 9,730
  4. Avatar for vertex 94. vertex Lv 1 9 pts. 9,724
  5. Avatar for Parclytaxel 95. Parclytaxel Lv 1 8 pts. 9,685
  6. Avatar for lolbaer 96. lolbaer Lv 1 8 pts. 9,673
  7. Avatar for jhullaert 97. jhullaert Lv 1 8 pts. 9,669
  8. Avatar for JasperD 98. JasperD Lv 1 8 pts. 9,657
  9. Avatar for sjoerdouwe 99. sjoerdouwe Lv 1 7 pts. 9,655
  10. Avatar for seeker 100. seeker Lv 1 7 pts. 9,642

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.