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447: De-novo Freestyle 12

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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  4. Avatar for test_group1 24. test_group1 1 pt. 642
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  7. Avatar for richard c 117. richard c Lv 1 4 pts. 9,455
  8. Avatar for harvardman 118. harvardman Lv 1 4 pts. 9,444
  9. Avatar for Coskun 119. Coskun Lv 1 4 pts. 9,435
  10. Avatar for djag 120. djag Lv 1 4 pts. 9,426

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.