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447: De-novo Freestyle 12

Closed since almost 15 years ago

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Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for name_in_progress 21. name_in_progress 1 pt. 7,778
  2. Avatar for DSN @ Home 22. DSN @ Home 1 pt. 7,553
  3. Avatar for R12 23. R12 1 pt. 7,514
  4. Avatar for test_group1 24. test_group1 1 pt. 642
  5. Avatar for Freedom Folders 25. Freedom Folders 1 pt. 642
  1. Avatar for 5316000421 161. 5316000421 Lv 1 1 pt. 8,839
  2. Avatar for fractalman 162. fractalman Lv 1 1 pt. 8,836
  3. Avatar for lunatik_2 163. lunatik_2 Lv 1 1 pt. 8,726
  4. Avatar for Tarsha 164. Tarsha Lv 1 1 pt. 8,718
  5. Avatar for leprechaun 165. leprechaun Lv 1 1 pt. 8,685
  6. Avatar for Arquibus 166. Arquibus Lv 1 1 pt. 8,669
  7. Avatar for 5416000325 167. 5416000325 Lv 1 1 pt. 8,661
  8. Avatar for bull 168. bull Lv 1 1 pt. 8,639
  9. Avatar for sbea3 169. sbea3 Lv 1 1 pt. 8,607
  10. Avatar for sjn 170. sjn Lv 1 1 pt. 8,566

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.