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447: De-novo Freestyle 12

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for name_in_progress 21. name_in_progress 1 pt. 7,778
  2. Avatar for DSN @ Home 22. DSN @ Home 1 pt. 7,553
  3. Avatar for R12 23. R12 1 pt. 7,514
  4. Avatar for test_group1 24. test_group1 1 pt. 642
  5. Avatar for Freedom Folders 25. Freedom Folders 1 pt. 642
  1. Avatar for Barbarrosa 191. Barbarrosa Lv 1 1 pt. 7,984
  2. Avatar for fuufuumonkey 192. fuufuumonkey Lv 1 1 pt. 7,979
  3. Avatar for 5414400229 193. 5414400229 Lv 1 1 pt. 7,964
  4. Avatar for poiuytrewq 194. poiuytrewq Lv 1 1 pt. 7,961
  5. Avatar for GeCe-eMeS 195. GeCe-eMeS Lv 1 1 pt. 7,955
  6. Avatar for thermo 196. thermo Lv 1 1 pt. 7,946
  7. Avatar for oaks 197. oaks Lv 1 1 pt. 7,940
  8. Avatar for Ducklordsid 198. Ducklordsid Lv 1 1 pt. 7,845
  9. Avatar for 5416000333 199. 5416000333 Lv 1 1 pt. 7,838
  10. Avatar for 5316000439 200. 5316000439 Lv 1 1 pt. 7,825

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.