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447: De-novo Freestyle 12

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

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    1. foldeRNA
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  2. Avatar for Seneca 152. Seneca Lv 1 1 pt. 9,004
  3. Avatar for LastAndroid 153. LastAndroid Lv 1 1 pt. 8,996
  4. Avatar for martinf 154. martinf Lv 1 1 pt. 8,980
  5. Avatar for birdy_ssr 155. birdy_ssr Lv 1 1 pt. 8,961
  6. Avatar for momadoc 156. momadoc Lv 1 1 pt. 8,935
  7. Avatar for joschi 157. joschi Lv 1 1 pt. 8,929
  8. Avatar for kbob 158. kbob Lv 1 1 pt. 8,905
  9. Avatar for zyxzenze 159. zyxzenze Lv 1 1 pt. 8,866
  10. Avatar for RyeSnake 160. RyeSnake Lv 1 1 pt. 8,863

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.