Placeholder image of a protein
Icon representing a puzzle

447: De-novo Freestyle 12

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
August 16, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for foldeRNA
    1. foldeRNA
    100 pts. 10,969
  2. Avatar for Anthropic Dreams 2. Anthropic Dreams 81 pts. 10,871
  3. Avatar for Contenders 3. Contenders 65 pts. 10,865
  4. Avatar for Void Crushers 4. Void Crushers 52 pts. 10,789
  5. Avatar for Go Science 5. Go Science 41 pts. 10,730
  6. Avatar for Russian team 6. Russian team 32 pts. 10,311
  7. Avatar for Deleted group 7. Deleted group pts. 10,201
  8. Avatar for SETI.Germany 8. SETI.Germany 18 pts. 10,149
  9. Avatar for L'Alliance Francophone 9. L'Alliance Francophone 14 pts. 10,131
  10. Avatar for Natural Abilities 10. Natural Abilities 10 pts. 10,106
  1. Avatar for marie_s 11. marie_s Lv 1 81 pts. 10,677
  2. Avatar for mimi 12. mimi Lv 1 79 pts. 10,672
  3. Avatar for delawarekid 13. delawarekid Lv 1 78 pts. 10,667
  4. Avatar for Rav3n_pl 14. Rav3n_pl Lv 1 76 pts. 10,665
  5. Avatar for Bletchley Park 15. Bletchley Park Lv 1 74 pts. 10,651
  6. Avatar for katling 16. katling Lv 1 73 pts. 10,629
  7. Avatar for BootsMcGraw 17. BootsMcGraw Lv 1 71 pts. 10,626
  8. Avatar for NinjaGreg 18. NinjaGreg Lv 1 69 pts. 10,613
  9. Avatar for keypad5 19. keypad5 Lv 1 68 pts. 10,605
  10. Avatar for spmm 20. spmm Lv 1 66 pts. 10,601

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Leucine at residue 83 is highly predicted to be part of a sheet. However, the Leucine at residue 62 has an equal probability of being anything.