Placeholder image of a protein
Icon representing a puzzle

469: De-novo Freestyle 14

Closed since over 14 years ago

Advanced Overall Prediction

Summary

Created
October 17, 2011
Expires
Max points
100
Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

  1. Avatar for Anthropic Dreams
    1. Anthropic Dreams
    100 pts. 10,478
  2. Avatar for Androids 2. Androids 88 pts. 10,462
  3. Avatar for Contenders 3. Contenders 77 pts. 10,456
  4. Avatar for Void Crushers 4. Void Crushers 67 pts. 10,438
  5. Avatar for foldeRNA 5. foldeRNA 58 pts. 10,305
  6. Avatar for Go Science 6. Go Science 50 pts. 10,204
  7. Avatar for Deleted group 7. Deleted group pts. 10,201
  8. Avatar for L'Alliance Francophone 8. L'Alliance Francophone 37 pts. 10,170
  9. Avatar for CHNO Junkies 9. CHNO Junkies 31 pts. 10,126
  10. Avatar for BOINC@Poland 10. BOINC@Poland 26 pts. 10,110
  1. Avatar for timroberts16 61. timroberts16 Lv 1 62 pts. 9,950
  2. Avatar for Flagg65a 62. Flagg65a Lv 1 62 pts. 9,946
  3. Avatar for Hazelton 63. Hazelton Lv 1 61 pts. 9,944
  4. Avatar for caglar 64. caglar Lv 1 61 pts. 9,939
  5. Avatar for gdnskye 65. gdnskye Lv 1 60 pts. 9,937
  6. Avatar for lamoille 66. lamoille Lv 1 60 pts. 9,925
  7. Avatar for vertex 67. vertex Lv 1 59 pts. 9,924
  8. Avatar for mangoman 68. mangoman Lv 1 59 pts. 9,922
  9. Avatar for sdrubenstein 69. sdrubenstein Lv 1 58 pts. 9,914
  10. Avatar for Leonardo_C 70. Leonardo_C Lv 1 58 pts. 9,911

Comments

beta_helix Staff Lv 1

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.