469: De-novo Freestyle 14

Closed since over 14 years ago

Summary

• Created: October 17, 2011
• Expires: October 25, 2011 at 10:00 UTC
• Max points: 100

Description

We are giving you this currently unsolved protein as an extended chain. Use all your beta-sheet forming skills to fold it up as best as you can. The secondary structure predictions are posted in the puzzle comments, but we have included them in the starting structure as well.

Top groups

• 1. Anthropic Dreams 100 pts. 10,478
• 2. Androids 88 pts. 10,462
• 3. Contenders 77 pts. 10,456
• 4. Void Crushers 67 pts. 10,438
• 5. foldeRNA 58 pts. 10,305
• 6. Go Science 50 pts. 10,204
• 7. Deleted group pts. 10,201
• 8. L'Alliance Francophone 37 pts. 10,170
• 9. CHNO Junkies 31 pts. 10,126
• 10. BOINC@Poland 26 pts. 10,110

Top soloists

• 71. Oblique 57 pts. 9,908
• 72. LUKE1967 57 pts. 9,908
• 73. bertro 56 pts. 9,906
• 74. arcsign 56 pts. 9,904
• 75. infjamc 56 pts. 9,903
• 76. bamh 55 pts. 9,898
• 77. pgiles 55 pts. 9,893
• 78. doug.ehlert 54 pts. 9,887
• 79. B_2 54 pts. 9,887
• 80. Pyotr 53 pts. 9,886

Comments

[beta_helix]

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Valine at residue 12 is highly predicted to be part of a sheet. However, the Valine at residue 41 has an equal probability of being anything.