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573: Advanced CASP10 Refinement Puzzle: TR663

Closed since over 13 years ago

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Summary

Created: June 10, 2012
Expires: June 16, 2012 at 23:59 UTC
Max points: 100

Description

This puzzle was closed and reposted as puzzle 573b (identical starting model but with the alignment tool, so you can use the Cut Tool) based on this suggestion: http://fold.it/portal/node/992917#comment-18188 You can manually save any solutions from this puzzle and load them in 573b.

Top groups

1. Anthropic Dreams
100 pts. 10,978
2. Contenders 52 pts. 10,899
3. Go Science 24 pts. 10,789
4. foldeRNA 10 pts. 10,626
5. Freedom Folders 4 pts. 10,419
6. L'Alliance Francophone 1 pt. 10,349
7. Void Crushers 1 pt. 10,056
8. Deleted group pts. 9,644
9. Deleted group pts. 7,377

31. Jesse Pinkman Lv 1 2 pts. 9,730
32. LavenderSky Lv 1 1 pt. 9,704
33. auntdeen Lv 1 1 pt. 9,701
34. tela Lv 1 1 pt. 9,700
35. AsDawnBreaks Lv 1 1 pt. 9,644
36. gmn Lv 1 1 pt. 9,623
37. ivalnic Lv 1 1 pt. 9,558
38. KingLear Lv 1 1 pt. 9,553
39. anne romaine Lv 1 1 pt. 9,542
40. krulon Lv 1 1 pt. 9,516

Comments

beta_helix Staff Lv 1

June 10, 2012

Here is the CASP link for this Refinement target:
http://predictioncenter.org/casp10/target.cgi?id=103&view=refinement
__________________

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Leucines at residues 32 & 115 are highly predicted to be in a sheet. However, the Leucine at residue 103 is predicted to be in a helix.