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782: De-novo Freestyle 30: Hand-folding Round

Closed since over 12 years ago

Intermediate Overall Prediction Hand-Folding

Summary

Created
September 20, 2013
Expires
Max points
100
Description

We are giving you another currently unsolved protein as an extended chain. This round only GUI scripts are allowed and sharing has been disabled. After this puzzle expires, the puzzle will be re-posted and LUA scripts and sharing will be allowed. You'll be able to load in your solutions from this puzzle and use scripting and sharing.

Top groups

  1. Avatar for Contenders
    1. Contenders
    100 pts. 10,234
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  3. Avatar for Go Science 3. Go Science 68 pts. 10,056
  4. Avatar for Void Crushers 4. Void Crushers 55 pts. 10,012
  5. Avatar for Anthropic Dreams 5. Anthropic Dreams 44 pts. 10,005
  6. Avatar for Deleted group 6. Deleted group pts. 9,950
  7. Avatar for Beta Folders 7. Beta Folders 27 pts. 9,930
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  9. Avatar for Russian team 9. Russian team 16 pts. 9,829
  10. Avatar for L'Alliance Francophone 10. L'Alliance Francophone 12 pts. 9,783
  1. Avatar for Inkedhands 111. Inkedhands Lv 1 6 pts. 9,115
  2. Avatar for aendgraend 112. aendgraend Lv 1 6 pts. 9,108
  3. Avatar for JasperD 113. JasperD Lv 1 6 pts. 9,099
  4. Avatar for Vieve 114. Vieve Lv 1 5 pts. 9,092
  5. Avatar for micheldeweerd 115. micheldeweerd Lv 1 5 pts. 9,090
  6. Avatar for Jeanine718 116. Jeanine718 Lv 1 5 pts. 9,087
  7. Avatar for phi16 117. phi16 Lv 1 5 pts. 9,084
  8. Avatar for joremen 118. joremen Lv 1 5 pts. 9,076
  9. Avatar for Deleted player 119. Deleted player 5 pts. 9,075
  10. Avatar for wisky 120. wisky Lv 1 4 pts. 9,067

Comments

bkoep Staff Lv 1

We're still waiting on the secondary structure predictions for this protein. Check back later for updates!

bkoep Staff Lv 1

SPILPKAENVDSICIDFTNSIQKIYDDSESIQKILSEIATGKRTEKQSIQDYPSAEEYGTINIENNGGMTTMFYYEENGKYYIECPYKGIYEIENNFEDMI

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the Isoleucines at residues 13 and 25 are highly predicted to be part of a sheet. However, the Isoleucines at residues 31 and 38 are predicted to be part of a helix!