949: CASP11 Target Ts818: Sparse Data Contacts

Closed since over 11 years ago

Summary

• Created: July 26, 2014
• Expires: July 31, 2014 at 23:00 UTC
• Max points: 100

Description

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 2250 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

• 1. Anthropic Dreams 100 pts. 11,494
• 2. Go Science 80 pts. 11,350
• 3. L'Alliance Francophone 63 pts. 11,253
• 4. Void Crushers 49 pts. 11,191
• 5. Beta Folders 37 pts. 11,082
• 6. Gargleblasters 28 pts. 11,080
• 7. Contenders 21 pts. 11,015
• 8. Deleted group pts. 10,974
• 9. SETI.Germany 11 pts. 10,757
• 10. Deleted group pts. 10,576

Top soloists

• 91. Merf 5 pts. 9,204
• 92. goastano 5 pts. 9,193
• 93. MaartenDesnouck 5 pts. 9,193
• 94. parsnip 5 pts. 9,150
• 95. Deleted player pts. 9,118
• 96. gurra66 4 pts. 9,068
• 97. martinf 4 pts. 9,063
• 98. Grom 4 pts. 9,020
• 99. Mr_Jolty 4 pts. 9,018
• 100. Dj-P 4 pts. 9,005

Comments

[bkoep]

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.