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949: CASP11 Target Ts818: Sparse Data Contacts

Closed since over 11 years ago

Intermediate Overall Prediction CASP11 Predicted Contacts

Summary

Created: July 26, 2014
Expires: July 31, 2014 at 23:00 UTC
Max points: 100

Description

For this target, the CASP11 organizers have provided "sparse" experimental data about possible contacts in the protein. Contacts are scored with the Contact Map filter in this puzzle, and there is an upper limit of 2250 possible points from the filter. The starting structure is an extended chain, and secondary structure predictions can be found below in the puzzle comments.

Top groups

1. Anthropic Dreams
100 pts. 11,494
2. Go Science 80 pts. 11,350
3. L'Alliance Francophone 63 pts. 11,253
4. Void Crushers 49 pts. 11,191
5. Beta Folders 37 pts. 11,082
6. Gargleblasters 28 pts. 11,080
7. Contenders 21 pts. 11,015
8. Deleted group pts. 10,974
9. SETI.Germany 11 pts. 10,757
10. Deleted group pts. 10,576

31. CheezWhiz Lv 1 45 pts. 10,576
32. Deleted player pts. 10,530
33. Hiro Protagonist Lv 1 42 pts. 10,527
34. Bruno Kestemont Lv 1 41 pts. 10,526
35. Museka Lv 1 40 pts. 10,494
36. uhuuhu Lv 1 39 pts. 10,482
37. Tony Origami Lv 1 37 pts. 10,446
38. deLaCeiba Lv 1 36 pts. 10,401
39. Mike Cassidy Lv 1 35 pts. 10,379
40. smholst Lv 1 34 pts. 10,379

Comments

bkoep Staff Lv 1

Here is the sequence logo predicted by the SAM server:

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.