Recipe: ration wetware neurotrans print.Lua

created by zo3xiaJonWeinberg

Profile

• Name: ration wetware neurotrans print.Lua
• ID: 105577
• Shared with: Public
• Parent: optimist wetware neurotrans print.Lua
• Children:
  • ration wetware neurotrans predict.Lua
• Created on: January 13, 2022 at 09:55 AM UTC
• Updated on: January 13, 2022 at 09:55 AM UTC
• Description:

  Login to Fold.it to download. ; If you see Error: Cannot find the ; specified recipe, ; then it is currently unshared to ; your group, but you can ask for it. ; I test my recipes once for crashes ; after changing 1 line.

  Run on a Design puzzle.

  cysteine=c ; hair protein amino added to bagels. ; will lag whole Mac if you run ; AFK3.1.1 afterwards (as of 2021-06).

  Glycine Max is the Latin name ; for soya.

  Monosodium Glutamate: ; weijing, umami, savory ; The best starter amino acid ; if you want rank 70/100 ; Major component of nerves ; and neurons.

  Player Enzyme likes all valine.

  Glutamine (Q): amino in ; white kimchi and sauerkraut. ; Conditionally essential amino. ; Can be converted from citrate or ; glutamate when you're not sick, ; and thus tastes in between citrus ; and savory.

  Click on a folder and ; rename to .Lua to export.

  Update '22 ; Hold off on dousing w/ shoyu ; first to resume progress.

  Why keep simulating neurons ; in a recipe ; when I can simulate a ; neurotransmitter (glutamate) ; and an amino (tryptophan) ; that breaks into serotonin and ; dopamine directly within Foldit?

  I spilled a wrap making this recipe ; so try it.

  ration wetware ; neurotrans print.Lua ; The name wetware comes from ; Ex Machina. ; Yielded 12750->12771 on ; Beg. NCOV Jan 13 '22.

Code

--1st line blank
help()
--jon resetting clash for BWP and other new sliders for AFK too

--begin Josh's Fuse snippet
--  Josh's Fuse - 6 Nov 2020 - see notes at end

--

print ( "Josh's Fuse" )
recentbest.Restore()--Save ()                 -- Save the current pose as the recent best pose.


rbstartScore = current.GetEnergyScore ()      -- Get the current energy score. 

print ( "rb starting score = " .. rbstartScore ) -- print the starting score



behavior.SetPackingImportance(0.17)

seventeen = behavior.GetPackingImportance()

behavior.SetPackingImportance(0.18)

eighteen = behavior.GetPackingImportance()

modding = true

if (seventeen == eighteen) then
  modding = false
end

function resetBehavior()

    behavior.SetClashImportance ( 1.0 )

    behavior.SetSidechainHBondImportance ( 1.0 )

    behavior.SetBackboneHBondImportance ( 1.0 )

    behavior.SetPackingImportance ( 1.0 )

    behavior.SetHidingImportance ( 1.0 )
    behavior.SetPairwiseImportance ( 1.0 ) 

end
--end Josh's Fuse snippet

    resetBehavior()
band.DeleteAll()
freeze.UnfreezeAll()    

oracleStartScore=0
--save.SaveSolution("scoring")
save.Quicksave(1) --"the one"
--save.SaveSolution("oracle")
save.Quicksave(2)


while true do
oracleFeeling=current.GetEnergyScore()-oracleStartScore

oracleSays=oracleFeeling<=0
--structure.IsHydrophobic(structure.GetCount()) --oracle bones attempt
print("oracle feels "..oracleFeeling)
print(oracleSays)
oracleStartScore=current.GetEnergyScore()

--save.LoadSolutionByName("scoring")
save.Quickload(1)

behavior.SetFiltersDisabled(false)

startscore=current.GetEnergyScore()
repeat

iterstartscore=current.GetEnergyScore()
if (oracleSays) then
behavior.SetClashImportance(1)
else
behavior.SetClashImportance(0.5+math.tanh(oracleFeeling)/2)
end
structure.ShakeSidechainsAll(1)

structure.WiggleAll(1)
structure.MutateSidechainsAll(1)
improv=current.GetEnergyScore()-iterstartscore
print("improv "..improv) 
until improv<=6

score=current.GetEnergyScore()-startscore
save.SaveSolution("scoring")
save.Quicksave(1)


behavior.SetFiltersDisabled(true)
--save.LoadSolutionByName("oracle")
save.Quickload(2)
if score<=0 then
for neuron=1,math.floor(9/(score+1))+1 do
randseg=math.random(1,structure.GetCount())
for i=randseg,randseg do
--chose from dendrite tree plant protein or brain dendrite protein
aminoChoices={'w','e'}--,'q','p','l','v','g','f','y','c'}
amino=aminoChoices[math.random(#aminoChoices)]
structure.SetAminoAcid(i,amino)
    --P for proline and an amino in in Prolamins in gluten in Pizza
    --glutamine is also in prolamins

    --glutelins [in gluten] "are also rich in hydrophobic amino acids, 
--with a content of phenylalanine [F], valine, tyrosine [Y], 
--proline and leucine corresponding to approximately 45% of the amino acid sequence" --Wikipedia
    --glutelins can also have disulfide bonds but cysteine is made from feathers/fur
    -- and IDK how it tastes but I'm guessing bad like taurine
    --but glutathione (glutamate+glutamine+cysteine) is in plants,fungi,animals too

    --e for msg (Monosodium GLUtamate) in tomato and cheese
    --options: arndceqghilkmfpstwyv
    --g for glycine in Glycine Max (soy)
    --v for valine, suggested by Enzyme for 1947
    --Histidine
    --glutamine is Q, looks exactly the same in foldit without View (see "keneng") Atoms
    --I guess U is reserved for uracil?
    --Leucine
    --D for Aspartate (Gyoro-Gyoro's arms)
    --N for asparagine (ASN), also Gyoro-Gyoro
    --t for threonine
    --w for tryptophan
end
end
end

behavior.SetClashImportance(1)
structure.WiggleAll(1)
save.SaveSolution("oracle")
save.Quicksave(2)

end