Recipe: 677 Structure 6 structs

created by gramps

Profile

• Name: 677 Structure 6 structs
• ID: 45374
• Shared with: Public
• Parent: None
• Children: None
• Created on: February 15, 2013 at 18:00 PM UTC
• Updated on: February 15, 2013 at 18:00 PM UTC
• Description:

  yields the structs from the extended chain likely the 673 default structs

Code

newprog = "677 Structure 6 structs"
--
-- autogenerated code

local Struct_Types = {
["L"] = "Loop",
["E"] = "Sheet",
["H"] = "Helix",
["M"] = "Ligand" }

function Make_All_Loop()
  selection.SelectAll()
  structure.SetSecondaryStructureSelected("L")
  print("everything has been changed to a loop")
  selection.DeselectAll()
end -- function Make_All_Loop

function Restore_One_Stuct(s_start,s_end,s_type)
selection.SelectRange(s_start,s_end)
print(Struct_Types[s_type].."("..s_start..","..s_end..")")
structure.SetSecondaryStructureSelected(s_type)
selection.DeselectAll()
end -- function Restore_One_Stuct

function Restore_Structs()
  Restore_One_Stuct(1,11,"L")
  Restore_One_Stuct(12,19,"H")
  Restore_One_Stuct(20,24,"L")
  Restore_One_Stuct(25,27,"E")
  Restore_One_Stuct(28,35,"H")
  Restore_One_Stuct(36,36,"L")
  Restore_One_Stuct(37,37,"H")
  Restore_One_Stuct(38,41,"L")
  Restore_One_Stuct(42,46,"E")
  Restore_One_Stuct(47,60,"L")
  Restore_One_Stuct(61,67,"H")
  Restore_One_Stuct(68,74,"L")
  Restore_One_Stuct(75,79,"E")
  Restore_One_Stuct(80,84,"L")
  Restore_One_Stuct(85,88,"E")
  Restore_One_Stuct(89,91,"L")
  Restore_One_Stuct(92,97,"E")
  Restore_One_Stuct(98,108,"L")
  Restore_One_Stuct(109,113,"E")
  Restore_One_Stuct(114,115,"L")
end -- function Restore_Structs

print("begin ",newprog)

if structure.GetCount() == 	115	 then -- num segs match
  Make_All_Loop()
  Restore_Structs()
else -- print warning line
  print("segment number mismatch -- no action taken")
end

print("end ",newprog)

Comments

[gramps]

begin 677 Structure 6 structs
everything has been changed to a loop
Loop(1,11)
Helix(12,19)
Loop(20,24)
Sheet(25,27)
Helix(28,35)
Loop(36,36)
Helix(37,37)
Loop(38,41)
Sheet(42,46)
Loop(47,60)
Helix(61,67)
Loop(68,74)
Sheet(75,79)
Loop(80,84)
Sheet(85,88)
Loop(89,91)
Sheet(92,97)
Loop(98,108)
Sheet(109,113)
Loop(114,115)
end 677 Structure 6 structs

Can be used on the starts that don't have their own structs as a starting guess

Remember that public Recipe: autogen structure code V1 …
https://fold.it/portal/recipe/43480

can be used to capture / share manual structs edits