Recipe: 678 comment structs

created by gramps

Profile

• Name: 678 comment structs
• ID: 45393
• Shared with: Public
• Parent: None
• Children: None
• Created on: February 18, 2013 at 19:21 PM UTC
• Updated on: February 18, 2013 at 19:21 PM UTC
• Description:

  yields structs predicted in the 674 comments with first 11 segs removed manual transcription was needed

Code

newprog = "678 comment structs"
--
-- autogenerated code

local Struct_Types = {
["L"] = "Loop",
["E"] = "Sheet",
["H"] = "Helix",
["M"] = "Ligand" }

function Make_All_Loop()
  selection.SelectAll()
  structure.SetSecondaryStructureSelected("L")
  print("everything has been changed to a loop")
  selection.DeselectAll()
end -- function Make_All_Loop

function Restore_One_Stuct(s_start,s_end,s_type)
selection.SelectRange(s_start,s_end)
print(Struct_Types[s_type].."("..s_start..","..s_end..")")
structure.SetSecondaryStructureSelected(s_type)
selection.DeselectAll()
end -- function Restore_One_Stuct

function Restore_Structs()
  Restore_One_Stuct(1,4,"E")
  Restore_One_Stuct(5,16,"L")
  Restore_One_Stuct(17,19,"E")
  Restore_One_Stuct(20,21,"L")
  Restore_One_Stuct(22,24,"H")
  Restore_One_Stuct(25,30,"E")
  Restore_One_Stuct(31,31,"L")
  Restore_One_Stuct(32,42,"H")
  Restore_One_Stuct(43,57,"L")
  Restore_One_Stuct(58,60,"E")
  Restore_One_Stuct(61,62,"L")
  Restore_One_Stuct(63,65,"H")
  Restore_One_Stuct(66,67,"L")
  Restore_One_Stuct(68,69,"H")
  Restore_One_Stuct(70,73,"L")
  Restore_One_Stuct(74,77,"E")
  Restore_One_Stuct(78,81,"L")
  Restore_One_Stuct(82,84,"E")
  Restore_One_Stuct(85,89,"L")
  Restore_One_Stuct(90,97,"E")
  Restore_One_Stuct(98,102,"L")
  Restore_One_Stuct(103,113,"E")
  Restore_One_Stuct(114,119,"L")
  Restore_One_Stuct(120,124,"E")
  Restore_One_Stuct(125,130,"L")
  Restore_One_Stuct(131,145,"E")
  Restore_One_Stuct(146,147,"L")
end -- function Restore_Structs

print("begin ",newprog)

if structure.GetCount() == 	147	 then -- num segs match
  Make_All_Loop()
  Restore_Structs()
else -- print warning line
  print("segment number mismatch -- no action taken")
end

print("end ",newprog)

Comments

[gramps]

begin 678 comment structs
everything has been changed to a loop
Sheet(1,4)
Loop(5,16)
Sheet(17,19)
Loop(20,21)
Helix(22,24)
Sheet(25,30)
Loop(31,31)
Helix(32,42)
Loop(43,57)
Sheet(58,60)
Loop(61,62)
Helix(63,65)
Loop(66,67)
Helix(68,69)
Loop(70,73)
Sheet(74,77)
Loop(78,81)
Sheet(82,84)
Loop(85,89)
Sheet(90,97)
Loop(98,102)
Sheet(103,113)
Loop(114,119)
Sheet(120,124)
Loop(125,130)
Sheet(131,145)
Loop(146,147)
end 678 comment structs

puzzle 678 page
https://fold.it/portal/node/994534

There's a link on the 678 page going to the comment under 674. As noted on the 678 page, the present puzzle omits 11 segs (from the N-end, old segs 1-11) so to use the comment structs you have to subtract 11 from each of the diagram numbers.