Recipe: 717 comment structs

created by gramps

Profile

• Name: 717 comment structs
• ID: 46119
• Shared with: Public
• Parent: None
• Children: None
• Created on: May 22, 2013 at 16:48 PM UTC
• Updated on: May 22, 2013 at 16:48 PM UTC
• Description:

  yields the structures listed in the comments under the puzzle 717 page

Code

newprog = "717 comment structs"
--
-- autogenerated code

local Struct_Types = {
["L"] = "Loop",
["E"] = "Sheet",
["H"] = "Helix",
["M"] = "Ligand" }

function Make_All_Loop()
  selection.SelectAll()
  structure.SetSecondaryStructureSelected("L")
  print("everything has been changed to a loop")
  selection.DeselectAll()
end -- function Make_All_Loop

function Restore_One_Stuct(s_start,s_end,s_type)
selection.SelectRange(s_start,s_end)
print(Struct_Types[s_type].."("..s_start..","..s_end..")")
structure.SetSecondaryStructureSelected(s_type)
selection.DeselectAll()
end -- function Restore_One_Stuct

function Restore_Structs()
  Restore_One_Stuct(1,14,"L")
  Restore_One_Stuct(15,29,"H")
  Restore_One_Stuct(30,43,"L")
  Restore_One_Stuct(44,66,"H")
  Restore_One_Stuct(67,70,"L")
  Restore_One_Stuct(71,82,"H")
  Restore_One_Stuct(83,88,"L")
  Restore_One_Stuct(89,89,"H")
  Restore_One_Stuct(90,94,"L")
  Restore_One_Stuct(95,110,"H")
  Restore_One_Stuct(111,121,"L")
  Restore_One_Stuct(122,122,"H")
  Restore_One_Stuct(123,124,"E")
  Restore_One_Stuct(125,128,"L")
  Restore_One_Stuct(129,135,"H")
  Restore_One_Stuct(136,138,"L")
end -- function Restore_Structs

print("begin ",newprog)

if structure.GetCount() == 	138	 then -- num segs match
  Make_All_Loop()
  Restore_Structs()
else -- print warning line
  print("segment number mismatch -- no action taken")
end

print("end ",newprog)

Comments

[gramps]

begin 717 comment structs
everything has been changed to a loop
Loop(1,14)
Helix(15,29)
Loop(30,43)
Helix(44,66)
Loop(67,70)
Helix(71,82)
Loop(83,88)
Helix(89,89)
Loop(90,94)
Helix(95,110)
Loop(111,121)
Helix(122,122)
Sheet(123,124)
Loop(125,128)
Helix(129,135)
Loop(136,138)
end 717 comment structs

puzzle 717 page:
https://fold.it/portal/node/995186

These structs are also supposed to be available from the extended chain in the alignment tool but I couldn't figure out how to get them that way.