Recipe: 949 SS from contact map

created by Susume

Profile

• Name: 949 SS from contact map
• ID: 49714
• Shared with: Public
• Parent: None
• Children: None
• Created on: July 27, 2014 at 21:15 PM UTC
• Updated on: July 27, 2014 at 21:15 PM UTC
• Description:

  For puzzle 949 Ts818 or Tc818 only! Secondary structure: sheets from contact map, helices from a related protein 4hyz (see pdb.org). First two sheets curve a lot, may have beta bulges (use google), and may not bond all the way along.

Code

-- For puzzle 949 Ts818 or Tc818 only!
-- SS sheets from contact map
-- Helices from homolog (related protein) 4hyz
-- Note that first two sheets curve a lot and may not bond all the way along

selection.SelectAll()
structure.SetSecondaryStructureSelected("L")
selection.DeselectAll()
selection.SelectRange(58,71)
selection.SelectRange(74,88)
selection.SelectRange(92,102)
selection.SelectRange(112,121)
selection.SelectRange(128,130)
structure.SetSecondaryStructureSelected("E")
selection.DeselectAll()
selection.SelectRange(2,17)
selection.SelectRange(21,25)
selection.SelectRange(30,33)
selection.SelectRange(38,55)
structure.SetSecondaryStructureSelected("H")
selection.DeselectAll()