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2303: Electron Density Reconstruction 40

Closed since almost 3 years ago

Novice Overall Prediction Electron Density

Summary

Created
May 15, 2023
Expires
Max points
100
Description

The structure of this protein has already been solved and published, but close inspection suggests that there are some problems with the published solution. We'd like to see if Foldit players can use the same electron density data to reconstruct a better model. The individual chains in this protein have the same sequence.

Sequence
RMKQLEDKVEELLSKAYHLENEVARLKKLVGER

Top groups

  1. Avatar for Gargleblasters 11. Gargleblasters 1 pt. 23,066
  2. Avatar for SHELL 12. SHELL 1 pt. 22,985
  3. Avatar for AlphaFold 13. AlphaFold 1 pt. 22,984
  4. Avatar for Andrew's Foldit group 14. Andrew's Foldit group 1 pt. 22,929
  5. Avatar for JAWS PLAYERS 15. JAWS PLAYERS 1 pt. 22,601
  1. Avatar for BootsMcGraw 21. BootsMcGraw Lv 1 25 pts. 23,483
  2. Avatar for AlkiP0Ps 22. AlkiP0Ps Lv 1 23 pts. 23,481
  3. Avatar for phi16 23. phi16 Lv 1 21 pts. 23,478
  4. Avatar for Steven Pletsch 24. Steven Pletsch Lv 1 20 pts. 23,465
  5. Avatar for christioanchauvin 25. christioanchauvin Lv 1 18 pts. 23,435
  6. Avatar for WBarme1234 26. WBarme1234 Lv 1 17 pts. 23,434
  7. Avatar for akaaka 27. akaaka Lv 1 15 pts. 23,429
  8. Avatar for NPrincipi 28. NPrincipi Lv 1 14 pts. 23,417
  9. Avatar for equilibria 29. equilibria Lv 1 13 pts. 23,389
  10. Avatar for alcor29 30. alcor29 Lv 1 12 pts. 23,387

Comments

LociOiling Lv 1

This one is a good match for PDB 1RB4 and several others, but the PDB entries seem to missing the last two residues ("ER") we see in this puzzle.

WBarme1234 Lv 1

2 equal helics Only +3rd helic missing 2residues at beginning of sequence
rmkqledkveellskayhlenevarlkklvg
rmkqledkveellskayhlenevarlkklvg
__kqledkveellskayhlenevarlkklvg
LHHHHHHHHHHHHHHHHHHHHHHHHHHHHHL
LHHHHHHHHHHHHHHHHHHHHHHHHHHHHHL
__LHHHHHHHHHHHHHHHHHHHHHHHHHHHL