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2424: Electron Density Reconstruction 80

Closed since about 2 years ago

Novice Overall Prediction Electron Density

Summary

Created
February 22, 2024
Expires
Max points
100
Description

The structure of this protein has already been solved and published, but close inspection suggests that there are some problems with the published solution. We'd like to see if Foldit players can use the same electron density data to reconstruct a better model. There's two copies of two chains each in this structure, two of which are quite short.

Sequence
A, C: MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTLEKAF. B,D: FRSKGEELFT

Top groups

  1. Avatar for Kotocycle 11. Kotocycle 1 pt. 34,920
  2. Avatar for BOINC@Poland 12. BOINC@Poland 1 pt. 34,740
  3. Avatar for BIOTF345 13. BIOTF345 1 pt. 29,766
  4. Avatar for SHELL 14. SHELL 1 pt. 29,061
  5. Avatar for BIOF215 15. BIOF215 1 pt. 28,324
  6. Avatar for AlphaFold 16. AlphaFold 1 pt. 21,059
  7. Avatar for BioInformatics2024 17. BioInformatics2024 1 pt. 19,640
  1. Avatar for U202342272 111. U202342272 Lv 1 1 pt. 19,665
  2. Avatar for dhruv_pai_angle 112. dhruv_pai_angle Lv 1 1 pt. 19,640
  3. Avatar for yvonnnnne 113. yvonnnnne Lv 1 1 pt. 19,640
  4. Avatar for cheetoman2025 114. cheetoman2025 Lv 1 1 pt. 19,640
  5. Avatar for nkhamnei 115. nkhamnei Lv 1 1 pt. 19,640
  6. Avatar for Arlind1 116. Arlind1 Lv 1 1 pt. 19,640
  7. Avatar for Entropy 117. Entropy Lv 1 1 pt. 19,640
  8. Avatar for AdityaV 118. AdityaV Lv 1 1 pt. 19,640
  9. Avatar for shashwat1807 119. shashwat1807 Lv 1 1 pt. 19,640
  10. Avatar for Salmon_Ella 120. Salmon_Ella Lv 1 1 pt. 19,640

Comments

Serca Lv 1

Secondary structure prediction (JPred) is pretty close to what we see here.
LLLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLLLLLLLLLLLLLLLHHHHHHHHLLLLLLLEEEEEELLLLLLHHHHHHHHHHHLLLLHHHHHHHHHHHHLLLLEEEEEELHHHHHHHHHHHHHHHHHLLLLLEEEEELLLLLLLL