282: Mini-CASP 20 - Quick Freestyle 2

Closed since almost 16 years ago

Summary

• Created: April 04, 2010
• Expires: April 06, 2010 at 15:00 UTC
• Max points: 100

Description

Here is Mini-CASP 20 again, this time with the secondary structure predictions. We want to see how well you can do in just a couple days when starting from an extended chain, before we give you alignments to work with. The secondary structure predictions are posted in the puzzle comments. We hope they help!

Top groups

• 1. Richard Dawkins Foundation 100 pts. 10,649
• 2. Contenders 71 pts. 10,361
• 3. Void Crushers 49 pts. 10,326
• 4. SETI.Germany 33 pts. 10,059
• 5. Natural Abilities 22 pts. 10,008
• 6. Crunching Family 14 pts. 10,006
• 7. Boinc.be 8 pts. 9,966
• 8. Russian team 5 pts. 9,939
• 9. Deleted group pts. 9,725
• 10. L'Alliance Francophone 2 pts. 9,636

Top soloists

• 1. keypad5 100 pts. 10,649
• 2. aap 96 pts. 10,552
• 3. CharlieFortsConscience 91 pts. 10,353
• 4. Mark- 86 pts. 10,336
• 5. steveB 82 pts. 10,318
• 6. vertex 78 pts. 10,305
• 7. TheGUmmer 74 pts. 10,213
• 8. BootsMcGraw 70 pts. 10,174
• 9. lilovip 66 pts. 10,168
• 10. Dolichwier 63 pts. 10,122

Comments

[beta_helix]

Here is the sequence logo predicted by the SAM server.

H = helix
E = sheet
C = loop (or coil)

The taller the letter at each position, the higher the probability of that specific secondary structure for that amino acid.

For example, the amino acid Phenylalanine at residue 120 is highly predicted to be part of a sheet. However, the Lysine at residue 43 is predicted to have an equal probability of being anything.