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656: 40 Residue Symmetric Trimer Retry

Closed since over 13 years ago

Advanced Advanced Overall Overall Design Design Symmetry Symmetry

Summary

Created
November 21, 2012
Expires
Max points
100
Description

This is a small (40 residue) symmetric trimer design puzzle. It is the same as 623 except the Residue Interaction Energy filter is enabled. This filter will give a score bonus or penalty based on how well your residues are scoring compared to expected values.

Remember, a symmetric protein relies not only on how well folded each part is, but also on how well they interface together - and a symmetric trimer can be thought of as having three 2-fold interfaces. Stay tuned for higher-order symmetries, like tetrahedra and octahedra!

Top groups

  1. Avatar for Team Canada 21. Team Canada 1 pt. 10,081
  2. Avatar for Mojo Risin' 22. Mojo Risin' 1 pt. 9,661
  3. Avatar for Deleted group 23. Deleted group pts. 9,500
  4. Avatar for Atheists, Skeptics, & Humanists 24. Atheists, Skeptics, & Humanists 1 pt. 9,462
  5. Avatar for null pointer exception 25. null pointer exception 1 pt. 8,225
  6. Avatar for Richard Dawkins Foundation 26. Richard Dawkins Foundation 1 pt. 0
  7. Avatar for DSN @ Home 27. DSN @ Home 1 pt. 0
  1. Avatar for auntdeen 71. auntdeen Lv 1 28 pts. 12,086
  2. Avatar for kabubi 72. kabubi Lv 1 28 pts. 12,084
  3. Avatar for Flagg65a 73. Flagg65a Lv 1 27 pts. 12,082
  4. Avatar for Jim Fraser 74. Jim Fraser Lv 1 26 pts. 12,057
  5. Avatar for Hanto_FZ140E_4G 75. Hanto_FZ140E_4G Lv 1 26 pts. 12,039
  6. Avatar for bobcat 76. bobcat Lv 1 25 pts. 12,035
  7. Avatar for mat747 77. mat747 Lv 1 25 pts. 12,019
  8. Avatar for Squirrely 78. Squirrely Lv 1 24 pts. 12,014
  9. Avatar for PRL 79. PRL Lv 1 24 pts. 11,998
  10. Avatar for aendgraend 80. aendgraend Lv 1 23 pts. 11,993

Comments

bertro Lv 1

Are you sure the Residue Interaction Energy filter is enabled? Because I see lots of Tryptophans in my solution.

tamirh Lv 1

Below your score there should be an arrow plus something that says "No bonuses, no penalties., all conditions met" (ignore the mis-punctuation) and click on the arrow.

You can click "Show" to see where (if any) of your residues are not scoring well through the Residue IE filter.

tamirh Lv 1

If you upload a screenshot I can try to explain any seemingly odd behavior (or more likely I will ask one of the scientists).

bertro Lv 1

There is nothing that shows and there are no penalties either. The message in blue says "Residue IE Score met(REQUIRED)

I have 11 Tryptophans in my solution so far.

Sorry no facility to upload a screenshot here (unlike the feedback pages).