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735: Player-Solution Loop Redesign: Round 2

Closed since over 12 years ago

Intermediate Overall Design

Summary


Created
June 25, 2013
Expires
Max points
100
Description

This is a puzzle where you can redesign part of a player-designed protein. Galaxie's top-scoring solution from Puzzle 720 shows promise in the Baker Lab's folding simulations, but one loop seems to be a little troublesome. In Puzzle 734, you were allowed to design just this short loop, but now you can redesign an entire helix. Like the last puzzle, you can insert up to four residues and mutate residues near the helix, but the rest of the protein is frozen. The scientists at the Baker Lab like the general placement of this helix, so there is also an RMSD condition for the helix residues. You can load in solutions from Puzzle 734.

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